Information for 1-CTSCTGCWSTGTCTTY (Motif 1)

G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
Reverse Opposite:
C T A G C T G A C T G A T A C G T C G A T G A C C G T A A T C G C G T A C T A G G T A C G C T A A C T G A T C G C G T A A C T G
p-value:1e-15
log p-value:-3.625e+01
Information Content per bp:1.639
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets51.6 +/- 22.1bp
Average Position of motif in Background49.8 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTSCTGCWSTGTCTTY
CCCCCTGCTGTG-----
 A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTSCTGCWSTGTCTTY
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTSCTGCWSTGTCTTY
TNTCCTGCTGTGNNG--
 A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTSCTGCWSTGTCTTY
NNTCCTGCTGTGNNN--
 A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTSCTGCWSTGTCTTY
SNGCACCTGCHS-------
 A C G T A C G T A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTSCTGCWSTGTCTTY
CAGCTGNT--------
 G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTSCTGCWSTGTCTTY
TCNCCTGCTGNGNNN--
 A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTSCTGCWSTGTCTTY
AACACCTGCT--------
 A C G T A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTSCTGCWSTGTCTTY
NNCACCTGNN--------
 A C G T A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTSCTGCWSTGTCTTY
AGCAGCTGCT--------
 A C G T A C G T G T A C C G A T T A G C G T A C C G A T A C T G G A T C G C A T T A C G C G A T A C T G A G C T A T G C G A C T A G C T A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T