Information for 11-GGGAAATTTCCCA (Motif 12)

A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A
Reverse Opposite:
G A C T A C T G A T C G C A T G C G T A C G T A G T C A A C G T A G C T C G A T A G T C A T G C A T G C
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.795
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.9 +/- 23.9bp
Average Position of motif in Background57.8 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTTCCCA
-GGGAATTTCC--
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGGAAATTTCCCA
-GGGAATTTCC--
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGAAATTTCCCA
NGGGGATTTCCC-
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGGAAATTTCCCA
-GGGGATTTCC--
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGGAAATTTCCCA
-GGGGATTTCC--
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GGGAAATTTCCCA--
-----HTTTCCCASG
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGGAAATTTCCCA-
----ATTTTCCATT
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGGAAATTTCCCA--
-----ATTTTCCATT
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PH0061.1_Hoxb6/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAATTTCCCA--
NNNGTAATTACNNATA
 A C G T A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGGAAATTTCCCA-
----ATTTTCCATT
 A T C G A T C G C T A G C G T A C T G A G T C A A C G T A C G T A C G T G T A C A T G C T A G C C T G A A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T