Information for 8-VRCBCACGCA (Motif 9)

T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A
Reverse Opposite:
G A C T A C T G T G A C A C T G A G C T A T C G T C G A T C A G A G T C A G T C
p-value:1e-11
log p-value:-2.715e+01
Information Content per bp:1.457
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif232.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets42.0 +/- 22.6bp
Average Position of motif in Background49.0 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR2/MA0472.2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-VRCBCACGCA
ACGCCCACGCA
A C G T T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:VRCBCACGCA
----CACGCA
T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---VRCBCACGCA--
CTACGCCCACGCACT
A C G T A C G T A C G T T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:VRCBCACGCA
CRCCCACGCA
T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

EGR4/MA0733.1/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---VRCBCACGCA---
TTACGCCCACGCATTT
A C G T A C G T A C G T T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:VRCBCACGCA-
-TBGCACGCAA
T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--VRCBCACGCA
YCCGCCCACGCN
A C G T A C G T T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--VRCBCACGCA--
TCCGCCCCCGCATT
A C G T A C G T T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:VRCBCACGCA
TGCTGAGTCA
T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-VRCBCACGCA------
CGACCCAATCAACGGTG
A C G T T C A G T C A G A G T C A G C T T A G C T C G A T G A C A C T G T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G