Information for 13-TGGCTGACCA (Motif 14)

A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A
Reverse Opposite:
C G A T A C T G A C T G G C A T A G T C C G T A C T A G A G T C T A G C C T G A
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.838
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif74.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets48.5 +/- 27.8bp
Average Position of motif in Background50.6 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TGGCTGACCA
AATTTGCTGAC--
 A C G T A C G T A C G T A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TGGCTGACCA
----TGACCT
 A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0041.1_Mafb_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGGCTGACCA---
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGCTGACCA-
-TGCTGACTCA
 A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGGCTGACCA
AAAATGCTGACT-
 A C G T A C G T A C G T A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGGCTGACCA--
----TGACCYCT
 A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGCTGACCA
-NGCTN----
 A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGGCTGACCA-
AAAWWTGCTGACWWD
 A C G T A C G T A C G T A C G T A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGGCTGACCA--
----TGACCTYA
 A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGACCA
TWGTCTGV---
 A C G T A G C T A T C G C T A G A G T C A C G T A C T G C G T A T G A C G T A C G C T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T