Information for 16-TGCCCTACCA (Motif 35)

A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T C T A G C T A G A C G T C G T A A C T G A C T G T A C G A G T C C G T A
p-value:1e-7
log p-value:-1.791e+01
Information Content per bp:1.924
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif42.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets38.7 +/- 27.1bp
Average Position of motif in Background49.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCTACCA-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTACCA
ATGCCCACC--
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCCCTACCA----
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCCCTACCA
TGACCT----
 A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTACCA
CTGCCCGCA--
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTACCA
GTGACCTT---
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCCCTACCA
TGACCTARTT
 A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCCCTACCA
TGACCTYA--
 A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGCCCTACCA---
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTACCA---
TTGACCTANTTATN
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A