Information for 16-GTTTATGCAAAATGTT (Motif 17)

A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
Reverse Opposite:
G C T A C G T A G T A C C G T A C G A T A C G T C G A T A C G T A C T G G T A C C G T A G A C T C T G A C G T A C T G A G T A C
p-value:1e-11
log p-value:-2.602e+01
Information Content per bp:1.735
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 14.0bp
Average Position of motif in Background37.7 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATGCAAAATGTT
ANATTTTTGCAANTN---
 A C G T A C G T A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTTATGCAAAATGTT
--TTATGCAAAT----
 A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTTATGCAAAATGTT
GHATATKCAT------
 A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTTTATGCAAAATGTT-
----ATGCAACAGGTGG
 A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATGCAAAATGTT
TNNATTATGCATANNTT-
 A C G T A C G T A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTTTATGCAAAATGTT
-AATATGCAAATT---
 A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTTTATGCAAAATGTT
--ATATGCAAAT----
 A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTTATGCAAAATGTT
NATTGTGCAAT-----
 A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTTTATGCAAAATGTT
--TTATGCAAATTA--
 A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTTTATGCAAAATGTT
--TTATGCAAT-----
 A C T G A G C T C G A T A G C T C G T A A C G T A C T G G T A C C G T A C G T A T G C A C G T A C G A T A C T G A C G T C A G T
A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T