Information for 7-AGAAAGAACGCTA (Motif 13)

C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
Reverse Opposite:
A C G T C G T A A C T G T A G C A C T G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A C G T
p-value:1e-12
log p-value:-2.791e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.7 +/- 20.5bp
Average Position of motif in Background40.0 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAAAGAACGCTA
ACAAAGGNBCCT-
 C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AGAAAGAACGCTA
AAATAAGAAAAAAC----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AGAAAGAACGCTA
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGAAAGAACGCTA
TATCATTAGAACGCT-
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGAAAGAACGCTA
ACAAAG-------
 C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AGAAAGAACGCTA
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------AGAAAGAACGCTA
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AGAAAGAACGCTA
TACTGGAAAAAAAA---
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGAAAGAACGCTA
GGAGAAAGGTGCGA-
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGAAAGAACGCTA
GGAACAAAGR------
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G C T G A C G T A A G T C A T C G G T A C C G A T C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T