Information for 21-ACCCACTATTTAG (Motif 30)

C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G
Reverse Opposite:
G T A C A C G T G T C A C G T A C T G A C G A T C G T A C T A G A C G T C T A G A C T G C T A G C G A T
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.799
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.9 +/- 22.8bp
Average Position of motif in Background50.5 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0027.1_Emx2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACCCACTATTTAG----
NNCCACTAATTAGNNNT
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T A C G T A C G T A C G T
T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T

PH0034.1_Gbx2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACCCACTATTTAG----
AANCGCTAATTAGCNNN
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T A C G T A C G T A C G T
G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

PH0092.1_Lhx2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACCCACTATTTAG-----
-TAAACTAATTAGTGAAC
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

PH0031.1_Evx1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACCCACTATTTAG----
NNNCACTAATTAGTNNT
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T A C G T A C G T A C G T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

PH0033.1_Gbx1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACCCACTATTTAG----
TGCCACTAATTAGTGTA
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T A C G T A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACCCACTATTTAG---
NNNCACTAATTANTNN
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

PH0030.1_Esx1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACCCACTATTTAG-----
-TCNATTAATTAATNNAN
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A G C G T C A T C G A G A C T G A C T C G T A C T G A A G C T G A C T C T G A C T G A G A C T A T C G T C A G C G T A C G A T

POU6F1/MA0628.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACCCACTATTTAG-
----ATTAATTAAT
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T
A C G T A C G T A C G T A C G T T C G A G A C T G C A T G T C A G T C A A C G T C A G T C G T A C T G A A G C T

LHX6/MA0658.1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACCCACTATTTAG-
----ACTAATTAGC
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G A C G T
A C G T A C G T A C G T A C G T T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ACCCACTATTTAG
-----CTAATTAA
 C G T A A G T C G T A C A G T C C G T A A G T C A C G T C G T A A G C T A C G T A C G T C G T A C A T G
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A