Information for 11-ATTGTGTTGT (Motif 23)

C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T
Reverse Opposite:
C T G A A G T C G C T A G C T A A G T C C T G A A G T C C G T A C G T A C G A T
p-value:1e-10
log p-value:-2.448e+01
Information Content per bp:1.842
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets61.0 +/- 20.3bp
Average Position of motif in Background53.2 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTGTTGT
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATTGTGTTGT
CTCATTGTC----
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTGTTGT--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATTGTGTTGT------
-NNNTGTTGTTGTTNG
 C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTGTGTTGT
ATTGTTTAN-
 C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTGTTGT----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATTGTGTTGT-
NNHTGTGGTTWN
 A C G T C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTTGT
CCATTGTTNY--
 A C G T A C G T C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTGTGTTGT-
AAAATTGTTATGAA
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTTGT
CCATTGTTYB--
 A C G T A C G T C G T A A C G T A C G T A C T G A G C T A C T G C A G T C A G T A C T G A G C T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T