Information for 10-TCATATTTCA (Motif 22)

A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A
Reverse Opposite:
C A G T C T A G G T C A C T G A C G T A A C G T G T C A G A C T A C T G C G T A
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.845
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets53.0 +/- 25.1bp
Average Position of motif in Background53.1 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---TCATATTTCA
GKVTCADRTTWC-
 A C G T A C G T A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TCATATTTCA
GKMTCADRTTWC-
 A C G T A C G T A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TCATATTTCA--
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCATATTTCA-----
TNGAATTTCATTNAN
 A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCATATTTCA---
TATCATAATTAAGGA
 A C G T A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCATATTTCA---
CTAATATTGCTAAA
 A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCATATTTCA---
CTAATATTGCTAAA
 A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCATATTTCA
AACATATGTC-
 A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TCATATTTCA
NNTTTTTCTTATNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCATATTTCA
ATGCATAATTCA
 A C G T A C G T A C G T G T A C C G T A C A G T C G T A A C G T A G C T A C G T A G T C G T C A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A