Information for 6-GCBCGGCHTCCCGGGA (Motif 17)

A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A
Reverse Opposite:
A C G T A G T C G T A C A G T C A C T G A C T G A C T G G T C A C A T G A C T G A G T C A T G C A C T G T A C G A C T G A G T C
p-value:1e-11
log p-value:-2.710e+01
Information Content per bp:1.834
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.9 +/- 30.4bp
Average Position of motif in Background59.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCBCGGCHTCCCGGGA
GCTCGGSCTC------
 A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCBCGGCHTCCCGGGA
GGCCCCGCCCCC-----
 A C G T A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCBCGGCHTCCCGGGA
------CTTCCNGGAA
 A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCBCGGCHTCCCGGGA
GCCCCGCCCCCTCCC-
 A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCBCGGCHTCCCGGGA---
----RGSMTBCTGGGAAAT
 A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCBCGGCHTCCCGGGA
GCTCCGCCCMCY----
 A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCBCGGCHTCCCGGGA
GCCCCGCCCCC-----
 A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCBCGGCHTCCCGGGA--
----NNCTTCCNGGAAGN
 A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCBCGGCHTCCCGGGA-
---NNNTTTCCTGGAAA
 A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A A C G T
A C G T A C G T A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCBCGGCHTCCCGGGA
NAGCCCCGCCCCCN----
 A C G T A C G T A C T G A G T C A G T C A G T C A T C G A C T G A G T C G A T C A C G T A G T C G T A C A G T C A C T G A C T G C T A G G T C A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T A C G T