Information for 22-KGMACCAGMSGGG (Motif 38)

A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C T A C G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C G T A C
p-value:1e-6
log p-value:-1.600e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.2 +/- 28.8bp
Average Position of motif in Background46.1 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:KGMACCAGMSGGG
----CCAGACAG-
 A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:KGMACCAGMSGGG-
----CCAGACRSVB
 A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:KGMACCAGMSGGG
---AACAGATGGC
 A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-KGMACCAGMSGGG
AGGAAACAGCTG--
 A C G T A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:KGMACCAGMSGGG
---AACAGATGGT
 A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:KGMACCAGMSGGG
--NAACAGCTGG-
 A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G
A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:KGMACCAGMSGGG
---AACAKATGGY
 A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G
A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:KGMACCAGMSGGG
-VNAVCAGCTGGC
 A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G
A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-KGMACCAGMSGGG---
CAAATCCAGACATCACA
 A C G T A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:KGMACCAGMSGGG----
--DCHCAGCAGGRGGCC
 A C T G A C T G G T C A G T C A A G T C A G T C C G T A A C T G G T C A A T G C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C