Information for 23-AGCACCCGGGACCTGA (Motif 37)

C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A
Reverse Opposite:
A G C T A T G C C T G A A C T G A T C G A C G T G T A C G T A C G T A C A T C G C T A G A T C G A C G T C T A G A T G C A C G T
p-value:1e-7
log p-value:-1.639e+01
Information Content per bp:1.720
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.2 +/- 24.8bp
Average Position of motif in Background53.9 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCACCCGGGACCTGA
-GGGGCCGAGGCCTG-
 C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGCACCCGGGACCTGA
CAGCC------------
 A C G T C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGCACCCGGGACCTGA--
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGCACCCGGGACCTGA--
TCAGCACCATGGACAGCTCC
 A C G T A C G T C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:AGCACCCGGGACCTGA
--------TGACCTYA
 C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:AGCACCCGGGACCTGA
--------TGACCT--
 C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:AGCACCCGGGACCTGA
-TCCCCTGGGGAC---
 C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A
A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:AGCACCCGGGACCTGA
TGCCCTNAGGGCA---
 C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:AGCACCCGGGACCTGA-
----CNNTTGACCTTTG
 C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A A C G T
A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:AGCACCCGGGACCTGA
-TCCCNNGGGACN---
 C G T A A T C G A G T C T C G A A T G C A G T C T A G C A C T G A C T G C A T G T C G A A T G C A G T C A G C T A T C G C T G A
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T