Information for 22-TTCTMACYCTGGCTGG (Motif 31)

C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G
Reverse Opposite:
A G T C G T A C C G T A T A C G T G A C G T A C C G T A A C T G T C G A C T A G C G A T A C T G C G T A A C T G T C G A C G T A
p-value:1e-7
log p-value:-1.737e+01
Information Content per bp:1.729
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.8 +/- 33.1bp
Average Position of motif in Background52.9 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTCTMACYCTGGCTGG
--GTCACGCTCNCTGA
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G
A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TTCTMACYCTGGCTGG
--------CTGTCTGG
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TTCTMACYCTGGCTGG
--------TWGTCTGV
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:TTCTMACYCTGGCTGG
----------NGCTN-
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TTCTMACYCTGGCTGG-----
----NNTNNTGTCTGGNNTNG
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TTCTMACYCTGGCTGG-
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A C G T C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TTCTMACYCTGGCTGG---
-------CGTGGGTGGTCC
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TTCTMACYCTGGCTGG-
--NNAATTCTCGNTNAN
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G A C G T
A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:6
Orientation:forward strand
Alignment:TTCTMACYCTGGCTGG
------VBSYGTCTGG
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:TTCTMACYCTGGCTGG--
---SCAGYCADGCATGAC
 C G A T A C G T T A G C G C A T G T A C C G T A A G T C A G C T A G T C C G A T A C T G A C T G A T G C A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C