Information for 18-AAAGGGGAGTTCAAGC (Motif 27)

C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
Reverse Opposite:
A C T G A G T C A G C T A C G T A T C G C G T A C G T A A G T C A C G T T G A C A G T C G T A C A G T C A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 14.1bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAAGGGGAGTTCAAGC---
-------AGGTCAAGGTCA
 C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAAGGGGAGTTCAAGC
--NGGGGATTTCCC--
 C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGGAGTTCAAGC
TTAAGAGGAAGTTA----
 A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AAAGGGGAGTTCAAGC
--TGGGGA--------
 C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AAAGGGGAGTTCAAGC
---GGGGATTTCC---
 C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGGGAGTTCAAGC
CAAAAAGGGGCGTGGCAT-
 A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGGAGTTCAAGC
AAAAAGAGGAAGTA----
 A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGGAGTTCAAGC
AAAAAGCGGAAGTA----
 A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AAAGGGGAGTTCAAGC
AAAGRGGAAGTG----
 C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AAAGGGGAGTTCAAGC
---GGGGATTTCC---
 C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A T G C C G T A C T G A C T A G A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T