Information for 16-CATGTCTGGGGTC (Motif 25)

A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A G T C A G T C C G T A A C T G C G T A G A T C C G T A A C G T A C T G
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 22.0bp
Average Position of motif in Background45.9 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CATGTCTGGGGTC-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CATGTCTGGGGTC-
--TGTCAGGGGGCG
 A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C A C G T
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CATGTCTGGGGTC
VBSYGTCTGG----
 A C G T A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CATGTCTGGGGTC
-CTGTCTGG----
 A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CATGTCTGGGGTC
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CATGTCTGGGGTC
--GGTCTGGCAT-
 A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATGTCTGGGGTC
-TWGTCTGV----
 A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CATGTCTGGGGTC------
--CTCCAGGGGTCAATTGA
 A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATGTCTGGGGTC------
--NTNNNGGGGTCANGNNN
 A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CATGTCTGGGGTC----
-NTNTGGGGGGTCNNNA
 A G T C C G T A A C G T C A T G A C G T A G T C A C G T C T A G A C T G C T A G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A