Information for 14-GGKTAGGHAGGCAGGA (Motif 20)

A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A
Reverse Opposite:
A C G T A T G C G T A C C G A T A T C G A G T C A G T C C A G T C A T G G T A C A G T C C G A T T C G A T G A C A G T C G T A C
p-value:1e-9
log p-value:-2.294e+01
Information Content per bp:1.726
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif32.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets58.9 +/- 32.7bp
Average Position of motif in Background41.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGKTAGGHAGGCAGGA---
-GGAAGGAAGGAAGGAAGG
 A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGKTAGGHAGGCAGGA-
--SCAGYCADGCATGAC
 A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGKTAGGHAGGCAGGA
AAGGKGRCGCAGGCA---
 A C G T A C G T A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGKTAGGHAGGCAGGA-
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GGKTAGGHAGGCAGGA--
-------AAGGCAAGTGT
 A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGKTAGGHAGGCAGGA-
-NGTAGGTTGGCATNNN
 A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGKTAGGHAGGCAGGA--
--GCAGCCAAGCGTGACN
 A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T A C G T
A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GGKTAGGHAGGCAGGA---
---------GGGAGGACNG
 A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GGKTAGGHAGGCAGGA-
-------CWGGCGGGAA
 A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GGKTAGGHAGGCAGGA---
--------GGGCGGGAAGG
 A C T G C T A G A C T G A G C T C G T A T A C G A C T G G T A C G T C A C T A G A C T G A T G C C G T A A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G