Information for 10-TGAGTCCAAGTGCACC (Motif 12)

C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
Reverse Opposite:
A T C G A C T G A C G T A C T G A T G C G C T A G A T C A C G T A C G T A C T G C A T G T G C A A G T C A G C T A G T C C G T A
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.783
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 25.8bp
Average Position of motif in Background40.7 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAGTCCAAGTGCACC
-AAGTTCAAGGTCAGC
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGAGTCCAAGTGCACC
--AGGTCAAGGTCA--
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAGTCCAAGTGCACC
--AGGTCAAGGTCA--
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGAGTCCAAGTGCACC
TGGGGCAAAGGTCA--
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTCCAAGTGCACC
NNAGGGACAAGGGCNC-
 A C G T C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGAGTCCAAGTGCACC
GGGGTCAAAGTCCAAT
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGAGTCCAAGTGCACC
----NTCAAGTGG---
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGAGTCCAAGTGCACC
TRAGGTCA--------
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGAGTCCAAGTGCACC
----NTCAAGTGGN--
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGAGTCCAAGTGCACC
AGAGTCCAAAGTCCA-
 C G A T T C A G T C G A A C T G A C G T G T A C A G T C G T C A C G T A C T A G C G A T T A C G A G T C G T C A T G A C A T G C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T