Information for 15-RGGSACSTCARGC (Motif 19)

C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G C G T A A T C G A C T G A C G T A T G C A G T C A G T C A G C T
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 27.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:RGGSACSTCARGC
----ACGTCA---
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C
A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RGGSACSTCARGC
-GTGACGTCACCG
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C
A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RGGSACSTCARGC
--TGACGTCA---
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C
A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:RGGSACSTCARGC-
---CGCCTCAGGCA
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C A C G T
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

XBP1/MA0844.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--RGGSACSTCARGC
AATGCCACGTCATC-
 A C G T A C G T C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RGGSACSTCARGC-
---AGCCTCAGGCA
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RGGSACSTCARGC-
---AGCCTCAGGCA
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:RGGSACSTCARGC
---TACGTCAT--
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C
A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RGGSACSTCARGC
-BGCACGTA----
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C
A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:RGGSACSTCARGC
--TTACGTCATN-
 C T G A A C T G A C T G A T C G C G T A A G T C A T G C A C G T A G T C C G T A C T A G A C T G A G T C
A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T