Information for 12-GCTTCTMAAG (Motif 25)

T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G
Reverse Opposite:
T A G C G C A T C G A T C A G T G T C A T A C G T C G A C T G A C A T G A G T C
p-value:1e-5
log p-value:-1.203e+01
Information Content per bp:1.711
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif235.1
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets53.5 +/- 27.2bp
Average Position of motif in Background49.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTTCTMAAG
GCTTCC----
 T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTTCTMAAG--
CCTTTTATAGNC
 T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTTCTMAAG
AGCCACTCAAG
 A C G T T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTCTMAAG-----
ANTTCTCAGGAANNN
 T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTTCTMAAG--
ANTTCTNNAGAA
 T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G A C G T A C G T
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCTMAAG---
AGNGTTCTAATGANN
 A C G T A C G T T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTTCTMAAG
RSCACTYRAG
 T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTTCTMAAG--
--TTCTNMGGAA
 T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G A C G T A C G T
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTCTMAAG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTTCTMAAG-
GCTCGTAAAAA
 T C A G G T A C A G C T A G C T A T G C C A G T G T C A C G T A C G T A A T C G A C G T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A