Information for 12-AGAAVTCCMTTTA (Motif 14)

C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C T G C A T G T A C G C G T A A C T G A G C T A G C T A G T C C G A T
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.745
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 27.9bp
Average Position of motif in Background52.5 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAAVTCCMTTTA--
AGAAATGACTTCCCT
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGAAVTCCMTTTA--
-----ANCGTTTANN
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGAAVTCCMTTTA--
-----NNCAATTANN
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGAAVTCCMTTTA-----
------DGWTTTATGRCN
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PH0088.1_Isl2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAAVTCCMTTTA---
CAAAATCAATTAATTT
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A A C G T A C G T A C G T
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGAAVTCCMTTTA----
-GGACTGAATTCATGCC
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A A C G T A C G T A C G T A C G T
A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGAAVTCCMTTTA
HNRAATCAAT---
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGAAVTCCMTTTA
--TAATCAATTA-
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGAAVTCCMTTTA----
-NNCATTCATTCATNNN
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGAAVTCCMTTTA-------
---NNTTCCTTTGATCTNNA
 C G T A C T A G C T G A C T G A T A G C A C G T A G T C G T A C G T A C A C G T A C G T A C G T T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A