Information for 8-AAKATAATAC (Motif 12)

C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G C G A T C G T A A C G T A C G T C G T A A C G T G T A C A G C T A G C T
p-value:1e-9
log p-value:-2.083e+01
Information Content per bp:1.842
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif93.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets60.2 +/- 26.1bp
Average Position of motif in Background51.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AAKATAATAC--
----TAATCCCN
 C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AAKATAATAC--
--GCTAATCCCC
 C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAKATAATAC--
TAAGATTATAATACGG
 A C G T A C G T A C G T A C G T C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAKATAATAC--
--CCTAATCCGC
 C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AAKATAATAC--
NANTATTATAATTNNN
 A C G T A C G T A C G T A C G T C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AAKATAATAC-
---TTAATCCC
 C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AAKATAATAC-
---YTAATCCY
 C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PH0124.1_Obox5_1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAKATAATAC-----
NANANTTAATCCCNNNN
 A C G T A C G T C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAKATAATAC-
---TTAATCCT
 C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAKATAATAC-
--CTTAATCCC
 C T G A C T G A A C T G T G C A A C G T C G T A C G T A A C G T C G T A A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C