Information for 9-GCTSTGTKSWATC (Motif 10)

A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
Reverse Opposite:
A C T G C T G A A C G T C G A T T A G C G T C A C G T A A G T C C G T A A T G C C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.287e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 25.8bp
Average Position of motif in Background18.2 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTSTGTKSWATC
GCTGTG-------
 A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTSTGTKSWATC
-CTTTGT------
 A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTSTGTKSWATC
NGCTN---------
 A C G T A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTSTGTKSWATC
YCTTTGTTCC---
 A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCTSTGTKSWATC--
----TGTGGATTNNN
 A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCTSTGTKSWATC
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCTSTGTKSWATC
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTSTGTKSWATC-
--NNTGTGGATTSS
 A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCTSTGTKSWATC
AGGVNCCTTTGT------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTSTGTKSWATC
CCWTTGTYYB---
 A C T G A G T C A C G T A T C G A C G T A C T G A C G T A C G T A T C G C G T A C G T A A G C T A G T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T