Information for 7-CAGAGAAAGAGAA (Motif 8)

T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A
Reverse Opposite:
A G C T A C G T A T G C G C A T A G T C A C G T A G C T A G C T A T G C G A C T A T G C A G C T A T C G
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.774
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif389.2
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets61.1 +/- 24.9bp
Average Position of motif in Background48.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1/MA0050.2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGAAAGAGAA-------
AAANNGAAAGTGAAAGTAAAN
 A C G T T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGAGAAAGAGAA
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGAGAAAGAGAA---
----GAAAGTGAAAGT
 T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGAAAGAGAA
GAAAGTGAAAGT---
 A C G T A C G T T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CAGAGAAAGAGAA---
----GAAACTGAAACT
 T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAGAGAAAGAGAA--------
---GGAAAGCGAAACCAAAAC
 T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAGAGAAAGAGAA---
----GRAASTGAAAST
 T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAGAGAAAGAGAA---
----GAAASYGAAASY
 T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAGAGAAAGAGAA-----
---GGAAANTGAAACTNA
 T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGAGAAAGAGAA
-AGAGGAAGTG--
 T A G C C T G A A T C G C T G A A T C G C T G A C T G A G T C A C T A G C G T A A T C G G T C A T C G A
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T