Information for 6-GAATGGTAGTTGTTTC (Motif 4)

A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C
Reverse Opposite:
C T A G G C T A C G T A C T G A A G T C G T C A C G T A A G T C A C G T C G T A A T G C G T A C C G T A C G A T A G C T A G T C
p-value:1e-11
log p-value:-2.683e+01
Information Content per bp:1.834
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 16.3bp
Average Position of motif in Background47.5 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAATGGTAGTTGTTTC
NNNTGGCAGTTGGTNN
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAATGGTAGTTGTTTC
---TGGCAGTTGN---
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAATGGTAGTTGTTTC
---TGGCAGTTGG---
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAATGGTAGTTGTTTC
-CACGGCAGTTGGTNN
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C
A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAATGGTAGTTGTTTC
GGGAATTGTAGT------
 A C G T A C G T A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAATGGTAGTTGTTTC--
--NNNTTAATTGGTTTTT
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C A C G T A C G T
A C G T A C G T C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAATGGTAGTTGTTTC--
---CTATAATTGTTAGCG
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C A C G T A C G T
A C G T A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GAATGGTAGTTGTTTC----
------TAATTGTTCTAAAC
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GAATGGTAGTTGTTTC
----GGCVGTTR----
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GAATGGTAGTTGTTTC
-----NTAATKGTTT-
 A C T G C T G A G C T A A C G T A C T G A T C G C G A T C G T A A C T G A C G T A C G T A C T G A G C T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T