Information for 2-AAAAAATGCAAGTCAT (Motif 2)

C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T A C T G C G T A A G T C A C G T A C G T A C T G A G T C C G T A G A C T C G A T G A C T A C G T A C G T G A C T
p-value:1e-33
log p-value:-7.732e+01
Information Content per bp:1.860
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 18.5bp
Average Position of motif in Background48.7 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAAAAATGCAAGTCAT
GAAAAAATTGCAAGG---
 A C G T A C G T C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AAAAAATGCAAGTCAT
---ATATGCAAAT---
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.60
Offset:11
Orientation:reverse strand
Alignment:AAAAAATGCAAGTCAT-
-----------GTCATN
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAAAAATGCAAGTCAT
---ATATGCAAATNNN
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAAAATGCAAGTCAT
AGAAAGTGAAAGTGA-
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAAAATGCAAGTCAT
--AATATGCAAATTAG
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
A C G T A C G T C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAAAAATGCAAGTCAT--
--NNNNTGCCAGTGATTG
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T A C G T A C G T
A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAAAAATGCAAGTCAT
---TTATGCAAAT---
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAAAATGCAAGTCAT
-GAAAGTGAAAGT---
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAAAATGCAAGTCAT
----AAGGCAAGTGT-
 C G T A T C G A C G T A C G T A C G T A C G T A A C G T A C T G A G T C G T C A C G T A A C T G A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T