Information for 13-GGGGAGTAAATTCACA (Motif 16)

A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G C T C G T A A G T C A C G T A T G C A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.930
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 35.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGGGAGTAAATTCACA--
--GGACTGAATTCATGCC
 A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A A C G T A C G T
A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGGGAGTAAATTCACA
TAGAGGGATTAAATTTC--
 A C G T A C G T A C G T A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGGGAGTAAATTCACA
TTAAGGGGATTAACTAC---
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGGGAGTAAATTCACA
TGAGGGGGATTAACTAT---
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGGGAGTAAATTCACA
-----TCCAATCCACA
 A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGGGAGTAAATTCACA
TGAGGGGGATTAACTAT---
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGGGAGTAAATTCACA--
------SSAATCCACANN
 A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGGGAGTAAATTCACA
-----GGAAATTCCC-
 A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGTAAATTCACA
TGGGGA-----------
 A C G T A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAGTAAATTCACA
AGGGAAGTCATTTCT--
 A C G T A C T G A C T G C T A G A T C G C G T A A C T G A C G T C T G A C G T A G T C A A C G T A C G T A G T C C T G A A G T C C G T A
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T