Information for 12-TTTGACTAACTGGTCA (Motif 15)

C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C G T A C G T C A A C T G A C G T A G C T C G T A A C T G A C G T A G T C C G T A G T C A C G T A
p-value:1e-7
log p-value:-1.644e+01
Information Content per bp:1.912
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 25.7bp
Average Position of motif in Background29.0 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTTGACTAACTGGTCA
-NTGATTGACAGN---
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTTGACTAACTGGTCA
--TGAGTGACAGSC--
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTTGACTAACTGGTCA
-BTGABTGACAGS---
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TTTGACTAACTGGTCA
------WDNCTGGGCA
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTTGACTAACTGGTCA
--TGACTCA-------
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A
A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTTGACTAACTGGTCA--
-ANCGCTAATTGGTCTNN
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A A C G T A C G T
A C G T T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTTGACTAACTGGTCA--
-NTNNTTAAGTGGTTANN
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A A C G T A C G T
A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTTGACTAACTGGTCA
DATGASTCATNN----
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TTTGACTAACTGGTCA----
----TCTCAAAGGTCACGAG
 C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PH0128.1_Otp/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TTTGACTAACTGGTCA
CGTAATTAATTAATTGG---
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G C G T A G T A C A C G T C T G A C G T A A G T C A C G T A C T G A C T G C G A T A G T C C G T A
T G A C T C A G G A C T C G T A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C A G T C A T G A C T G A C G T A C G T A C G T