Information for 9-CGCCATTTTA (Motif 13)

A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
Reverse Opposite:
C G A T G T C A T G C A T C G A G T C A A C G T A C T G A C T G T A G C A T C G
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.725
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif219.2
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets52.9 +/- 24.6bp
Average Position of motif in Background48.9 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CGCCATTTTA
GTCCGCCATTA--
 A C G T A C G T A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATTTTA
GCNGCCATCTTG
 A C G T A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATTTTA
GCCGCCATCTTG
 A C G T A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCATTTTA
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------CGCCATTTTA
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATTTTA
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGCCATTTTA----
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATTTTA
ACGTCATC---
 A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCCATTTTA
TGCCAA----
 A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATTTTA
ACGTCA-----
 A C G T A T G C A C T G A G T C A G T C C G T A C A G T A G C T A C G T A C G T G C T A
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T