Information for 6-TTTCTGCTATTGC (Motif 7)

G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
Reverse Opposite:
A T C G G T A C G T C A C G T A G A C T C G T A A T C G A G T C C G T A T A C G C G T A T G C A C T G A
p-value:1e-12
log p-value:-2.858e+01
Information Content per bp:1.777
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.1 +/- 26.4bp
Average Position of motif in Background52.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTGCTATTGC
ANATTTTTGCAANTN-
 A C G T A C G T A C G T G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCTGCTATTGC
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTCTGCTATTGC
VBSYGTCTGG------
 A C G T A C G T A C G T G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTTCTGCTATTGC
GGTCTGGCAT---
 G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTGCTATTGC
NNHTGTGGTTWN--
 A C G T G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCTGCTATTGC
NNNNTTGTGTGCTTNN--
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTCTGCTATTGC
CTGTCTGG------
 A C G T G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTCTGCTATTGC
GTCTGTGGTTT---
 A C G T G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTTCTGCTATTGC
NNTGTGGTTT---
 G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTTCTGCTATTGC----
-----GGGATTGCATNN
 G A C T A C G T C G A T A T G C A C G T A C T G A T G C A C G T C T G A C G A T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T