Information for 8-AGARYAWYAWCTCCWA (Motif 6)

C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G C G T A C T A G C G T A A C G T C T A G G C T A A C G T C T A G A G C T A C G T A G T C A C G T
p-value:1e-12
log p-value:-2.990e+01
Information Content per bp:1.855
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.2 +/- 13.7bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGARYAWYAWCTCCWA
NNAGATNVNWATCTN---
 A C G T A C G T C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGARYAWYAWCTCCWA
AAGAACATWHTGTTC--
 A C G T C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGARYAWYAWCTCCWA
VAGRACAKWCTGTYC--
 A C G T C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGARYAWYAWCTCCWA
ADGGYAGYAGCATCT-
 C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGARYAWYAWCTCCWA
VAGRACAKNCTGTBC--
 A C G T C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGARYAWYAWCTCCWA
NAGNACANNNTGTNCT-
 A C G T C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGARYAWYAWCTCCWA
CAAACAACAACACCT----
 A C G T A C G T A C G T C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGARYAWYAWCTCCWA
GGGAACATTGTGTTCCC
 A C G T C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGARYAWYAWCTCCWA----
----GATAACATCCTAGTAG
 C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGARYAWYAWCTCCWA
NGGAACATNATGTACCC
 A C G T C G T A A C T G C G T A C T G A A G T C C G T A C G A T A G T C C G T A C G A T A G T C A C G T A G T C A G T C C G A T C G T A
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C