Information for 20-GGGGCAGAGGATG (Motif 30)

A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G
Reverse Opposite:
A G T C C G T A A G C T A G T C A G T C A C G T A T G C A C G T A C T G G T A C A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.224e+01
Information Content per bp:1.935
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 31.6bp
Average Position of motif in Background56.9 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGGCAGAGGATG
AGGGGTCAGAGGTCA
 A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCAGAGGATG
TGGGGCAAAGGTCA
 A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGGCAGAGGATG
GTAGGGCAAAGGTCA
 A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGGGCAGAGGATG-
----AACAGGAAGT
 A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGGCAGAGGATG
TAGGGCAAAGGTCA
 A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCAGAGGATG
NNTNNGGGGCGGNGNGN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCAGAGGATG
GTGGGGGAGGGG---
 A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGGGCAGAGGATG--
-----AGAGGAAGTG
 A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGGGCAGAGGATG---
----NDCAGGAARTNN
 A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCAGAGGATG
NNTNAGGGGCGGNNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T C G C G T A A C T G A C T G C T G A C G A T A C T G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T