Information for 5-TCAGAGATGACAA (Motif 3)

A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A
Reverse Opposite:
A C G T A G C T A C T G A C G T A G T C C T G A A C G T T A G C A C G T A G T C A C G T A C T G C G T A
p-value:1e-17
log p-value:-4.058e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.1 +/- 29.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCAGAGATGACAA
----ARNTGACA-
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCAGAGATGACAA
-----CATGAC--
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAGAGATGACAA--
-AAGATAAGATAACA
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCAGAGATGACAA
------TTGACAG
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCAGAGATGACAA
-----RHTGWCAR
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

GATA2/MA0036.2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCAGAGATGACAA---
--NCAGATAAGAANNN
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCAGAGATGACAA----
--AAAAATAACAAACGG
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGATGACAA------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAGATGACAA
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCAGAGATGACAA
--ANAGATAAGAA
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G C T C T A G C G T A A G T C C T G A C G T A
A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A