Information for 10-GCCAGGGTGC (Motif 28)

A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C G T C A A T G C A G T C A G T C A C G T A C T G A T C G A G T C
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.920
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif136.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets43.3 +/- 23.0bp
Average Position of motif in Background50.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCCAGGGTGC-
TGTCAGGGGGCG
 A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGTGC-
TGCCCNGGGGCA
 A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAGGGTGC
CGTGCCAAG----
 A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGTGC
TGCCAA-----
 A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGGGTGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCAGGGTGC
TTGCCAAG----
 A C G T A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGTGC-
TGCCCTNGGGCA
 A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGTGC-
TGCCCTNGGGCA
 A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGTGC------
NNNAAGGGGGCGGGNNN
 A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCAGGGTGC--
CCGCCCAAGGGCAG
 A C G T A C G T A C T G A T G C A G T C C G T A A C T G A C T G A T C G A C G T A C T G A T G C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G