Information for 14-YSAAAACAAYRGG (Motif 22)

A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C C T G A A G C T A C G T A C T G A C G T A C G T A C G T A C G T T A C G C T A G
p-value:1e-9
log p-value:-2.149e+01
Information Content per bp:1.874
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.6 +/- 25.8bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:YSAAAACAAYRGG
--VRAACAATGG-
 A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:YSAAAACAAYRGG
--AAAACAATGG-
 A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:YSAAAACAAYRGG
---GAACAATGG-
 A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:YSAAAACAAYRGG
---GAACAATGGN
 A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.74
Offset:3
Orientation:forward strand
Alignment:YSAAAACAAYRGG
---RAACAATGGN
 A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:YSAAAACAAYRGG
--RNAACAATGG-
 A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----YSAAAACAAYRGG
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:YSAAAACAAYRGG
--AAAACAAAGG-
 A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:YSAAAACAAYRGG
-GTAAACAAT---
 A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--YSAAAACAAYRGG--
TCACGGAACAATAGGTG
 A C G T A C G T A G T C A T G C C G T A C G T A C G T A C G T A A G T C C G T A C T G A A G C T C T A G C T A G A C T G A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G