Information for 12-GTGAAAGATRRGA (Motif 16)

A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
Reverse Opposite:
G A C T A G T C A G C T A G T C G T C A A G C T A G T C A C G T A C G T C A G T A G T C G C T A A G T C
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.717
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif158.0
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets53.8 +/- 23.7bp
Average Position of motif in Background49.4 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTGAAAGATRRGA
GAAAGTGAAAGT-----
 A C G T A C G T A C G T A C G T A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GTGAAAGATRRGA
AGAAAGTGAAAGTGA---
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTGAAAGATRRGA
-----AGATAAGA
 A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGAAAGATRRGA-
---ANAGATAAGAA
 A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A A C G T
A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGAAAGATRRGA
AGGTGHCAGACA---
 A C G T A C G T A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGAAAGATRRGA
AGGTGNCAGACAG--
 A C G T A C G T A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTGAAAGATRRGA
--NNGAGATAAGA
 A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTGAAAGATRRGA-------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTGAAAGATRRGA
CSTGGGAAAD------
 A C G T A C G T A C G T A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGAAAGATRRGA
GGAGAAAGGTGCGA
 A C G T A C T G C G A T C T A G G T C A G T C A C G T A T C A G C T G A C A G T T C A G T C G A T C A G C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A