Information for 4-CTATGGCGAC (Motif 6)

A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C
Reverse Opposite:
T C A G A G C T G A T C T A C G A T G C A G T C G C T A C A G T T C G A T A C G
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.672
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.56%
Number of Background Sequences with motif1087.4
Percentage of Background Sequences with motif2.38%
Average Position of motif in Targets47.4 +/- 26.5bp
Average Position of motif in Background51.9 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CTATGGCGAC-
TTGCCATGGCAACN
 A C G T A C G T A C G T A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

Rfx1/MA0509.1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTATGGCGAC
GTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTATGGCGAC-
TAATGGCGGNC
 A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

ZBED1/MA0749.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTATGGCGAC---
CTATCGCGACATA
 A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C A C G T A C G T A C G T
G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTATGGCGAC-
TTGCCATGGCAACC
 A C G T A C G T A C G T A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

RFX4/MA0799.1/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CTATGGCGAC-
CGTTGCCATGGCAACG
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C A C G T
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTATGGCGAC
KGTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:8
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------CTATGGCGAC
CGGTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

RFX3/MA0798.1/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CTATGGCGAC-
CGTTGCCATGGCAACN
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTATGGCGAC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A T G C A G C T G T C A C G A T T C A G A T C G A T G C C T A G T C G A A G T C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G