Information for 5-GCGGAGACTGAGG (Motif 12)

A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C C G T A A C T G C A G T A G T C A C G T A G T C A G T C A C T G A T G C
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.897
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.7 +/- 23.8bp
Average Position of motif in Background50.8 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCGGAGACTGAGG--
----TGCCTGAGGCN
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCGGAGACTGAGG
---GAGSCCGAGC
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCGGAGACTGAGG--
----NGCCTGAGGCN
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCGGAGACTGAGG--
----AGCCTCAGGCA
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCGGAGACTGAGG
NCGCGGACGTTG---
 A C G T A C G T A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCGGAGACTGAGG----
--ATTGCCTGAGGCAAT
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGGAGACTGAGG
-CGGAGC------
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCGGAGACTGAGG----
-----SCCTSAGGSCAW
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCGGAGACTGAGG
---NNNANTGA--
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCGGAGACTGAGG----
-----GCCTCAGGGCAT
 A T C G A G T C A C T G A C T G G T C A A C T G G C T A A G T C C G A T A C T G G T C A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T