Information for 9-TAGCGGAGCG (Motif 10)

A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G
Reverse Opposite:
G T A C A T C G A G T C A C G T A T G C A G T C C T A G A G T C A G C T T G C A
p-value:1e-10
log p-value:-2.317e+01
Information Content per bp:1.854
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif229.6
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets42.1 +/- 26.0bp
Average Position of motif in Background51.2 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:TAGCGGAGCG
---CGGAGC-
 A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

POL001.1_MTE/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TAGCGGAGCG-----
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAGCGGAGCG
RGKGGGCGGAGC-
 A C G T A C G T A C G T A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TAGCGGAGCG
-----CAGCC
 A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TAGCGGAGCG
--GTGGAT--
 A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAGCGGAGCG
-AGAGGAA--
 A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGGAGCG----
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G A C G T A C G T A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGGAGCG--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TAGCGGAGCG
---NGAAGC-
 A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------TAGCGGAGCG
GCGGCGATATCGCAGCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G A T C A C T G A T C G G T C A A C T G A T G C A C T G
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T