Information for 1-CCGCCATKTT (Motif 1)

A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T
Reverse Opposite:
C T G A C G T A T G A C G C T A A C G T A C T G C T A G G A T C A T C G A T C G
p-value:1e-24
log p-value:-5.647e+01
Information Content per bp:1.675
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif564.3
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets49.2 +/- 27.4bp
Average Position of motif in Background52.7 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATKTT-
GCNGCCATCTTG
 A C G T A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATKTT-
GCCGCCATCTTG
 A C G T A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCGCCATKTT
GTCCGCCATTA-
 A C G T A C G T A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CCGCCATKTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CCGCCATKTT
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------CCGCCATKTT-
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCGCCATKTT
--GTCATN--
 A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCGCCATKTT
ACGTCATC--
 A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATKTT
TACGTCAT---
 A C G T A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGCCATKTT
-TGCCAA---
 A T G C T A G C C T A G G A T C A G T C T G C A C G A T A C T G C G A T A G C T
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T