Information for 7-CARGTTMGGTGCCGCG (Motif 8)

A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G
Reverse Opposite:
A G T C A C T G A G T C C T A G A C T G A G T C G T C A A T G C G T A C A C T G C T G A C G T A A T G C A G T C A C G T C T A G
p-value:1e-11
log p-value:-2.677e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.6 +/- 14.0bp
Average Position of motif in Background31.2 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CARGTTMGGTGCCGCG
NNNNTTGTGTGCTTNN
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CARGTTMGGTGCCGCG-
-------GGTCCCGCCC
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CARGTTMGGTGCCGCG
CAGGTGAGG-------
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CARGTTMGGTGCCGCG--
--GCGGAGGTGTCGCCTC
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G A C G T A C G T
A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CARGTTMGGTGCCGCG
-AGTTTCGGTTTCGN-
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G
A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CARGTTMGGTGCCGCG---
--AGCTCGGCGCCAAAAGC
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G A C G T A C G T A C G T
A C G T A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:CARGTTMGGTGCCGCG---
--NNTNNGGGGCGGNGNGN
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CARGTTMGGTGCCGCG
AACAGGTGT---------
 A C G T A C G T A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CARGTTMGGTGCCGCG--
-NNNNTTGGCGCCGANNN
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:CARGTTMGGTGCCGCG
-----TGGGTGTGGC-
 A G T C C G T A C T A G A T C G A C G T A G C T G T A C A C T G A T C G A C G T A C T G A G T C A G T C A C T G G T A C A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T