Information for 9-GGCCAGGCCA (Motif 31)

T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A
Reverse Opposite:
C G A T C A T G T A C G G A T C A T G C G C A T A T C G T C A G G A T C A T G C
p-value:1e-5
log p-value:-1.305e+01
Information Content per bp:1.659
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif545.1
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets47.1 +/- 25.3bp
Average Position of motif in Background48.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GGCCAGGCCA
--CTAGGCCT
 T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGCCAGGCCA
--CNAGGCCT
 T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGGCCA-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGCCAGGCCA--
--CAAGGHCANV
 T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCCAGGCCA-----
GACCACGCCCTTATT
 T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A A C G T A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAGGCCA---
NNGGCCACGCCTTTN
 A C G T A C G T T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGGCCA-
CNGTCACGCCAC
 A C G T T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCCAGGCCA
NTCAAGGTCA
 T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCCAGGCCA
BTCAAGGTCA
 T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCCAGGCCA
--TRAGGTCA
 T A C G C T A G A G T C T A G C C G T A T A C G C T A G A T G C G T A C G C T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A