Information for 17-CCMTCTTTCATGCAGC (Motif 23)

A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
Reverse Opposite:
A C T G G T A C A C G T T A C G A T G C T C G A C G A T C A T G C T G A C T G A C G T A C T A G T C G A C A T G C T A G A C T G
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.702
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.6 +/- 20.2bp
Average Position of motif in Background39.9 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCMTCTTTCATGCAGC--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCMTCTTTCATGCAGC
-TNCCTTTGATGT---
 A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCMTCTTTCATGCAGC--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCMTCTTTCATGCAGC
-TNCCTTTGATCTTN-
 A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCMTCTTTCATGCAGC
NNTTCCTTTGATCTANA
 A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCMTCTTTCATGCAGC
ATTTCCTTTGATCTATA
 A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCMTCTTTCATGCAGC
-----TTTAAT-----
 A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCMTCTTTCATGCAGC
GCNGCCATCTTG--------
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCMTCTTTCATGCAGC
---CCTTTGATGT---
 A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCMTCTTTCATGCAGC
NNTTCCTTTGATCTNNA
 A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G C T A G C T G A T C G C T A A G C T A T C G A G T C G T C A A C T G T A G C
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A