Information for 14-AGGSAACKSAMCYTKG (Motif 20)

C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G
Reverse Opposite:
A G T C G T C A C G T A C T G A C T A G C A G T G C A T T A G C G T C A A C T G A C G T A C G T A T C G A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.837
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 34.3bp
Average Position of motif in Background28.8 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AGGSAACKSAMCYTKG
------CTGACCTTTG
 C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGGSAACKSAMCYTKG
NAGGTCANTGACCT---
 A C G T C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGSAACKSAMCYTKG
-TGGAACAGMA-----
 C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGSAACKSAMCYTKG
RGGGCACTAACY----
 C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGSAACKSAMCYTKG
AAGGCAAGTGT------
 A C G T C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGGSAACKSAMCYTKG------
-------TGGACTTTGNNCTCN
 C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGGSAACKSAMCYTKG---
GAAGTANCACGAATNMRAGT
 A C G T C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AGGSAACKSAMCYTKG
-GGAAANTGAAACTNA
 C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:AGGSAACKSAMCYTKG-------
-------TGGACTTTGNNCTNTG
 C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:AGGSAACKSAMCYTKG
--GAAAMTGAAACT--
 C G T A A C T G A C T G A T G C C G T A C G T A A G T C A C G T A T C G C G T A G T C A A G T C A G C T A C G T A C G T A C T G
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T