Information for 1-CTAWAAATAGCWT (Motif 1)

A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
Reverse Opposite:
C T G A C G A T C A T G A G T C A C G T C T G A C G A T C G A T G C A T C G A T C A G T C T G A C T A G
p-value:1e-45
log p-value:-1.056e+02
Information Content per bp:1.665
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif9.26%
Number of Background Sequences with motif295.7
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets52.9 +/- 25.4bp
Average Position of motif in Background51.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-CTAWAAATAGCWT
GCTATAAATAGC--
 A C G T A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-CTAWAAATAGCWT
ACTATAAATAGA--
 A C G T A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CTAWAAATAGCWT
TCTAAAAATAGA--
 A C G T A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CTAWAAATAGCWT
GCTAAAAATAGC--
 A C G T A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CTAWAAATAGCWT
DCYAAAAATAGM--
 A C G T A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CTAWAAATAGCWT
KCCAAAAATAGC--
 A C G T A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CTAWAAATAGCWT
ATGCTAAAAATAGAA-
 A C G T A C G T A C G T A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.90
Offset:0
Orientation:forward strand
Alignment:CTAWAAATAGCWT
CCAAAAATAG---
 A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CTAWAAATAGCWT
CCATATATGG---
 A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTAWAAATAGCWT--
GTATAAAAGGCGGGG
 A G T C G A C T G T C A C G T A C G T A C G T A C G T A G A C T C G T A T C A G G T A C G C T A G A C T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G