Information for 3-ACAGAGGCCTGCC (Motif 8)

C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A C T A G A C T G A G T C A G T C A C G T G T A C A C G T A T C G A C G T
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 26.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:ACAGAGGCCTGCC
----AGGCCTNG-
 C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACAGAGGCCTGCC---
-CAAAGGCGTGGCCAG
 C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ACAGAGGCCTGCC
----AGGCCTAG-
 C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACAGAGGCCTGCC
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGGCCTGCC--
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAGGCCTGCC
AACAAAGG------
 A C G T C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:ACAGAGGCCTGCC----
--------CTGCCCGCA
 C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ACAGAGGCCTGCC
-CAAAGGTCAG--
 C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACAGAGGCCTGCC
SCAGYCADGCATGAC
 A C G T A C G T C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGGCCTGCC
AAAACAAAGG------
 A C G T A C G T A C G T C G T A A T G C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T