Information for 5-GTGACTTCWCAGAGTK (Motif 6)

A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
Reverse Opposite:
G T A C C G T A G A T C A C G T A G T C A C G T A C T G C G A T C T A G C T G A C G T A A C T G C G A T A G T C C G T A A G T C
p-value:1e-12
log p-value:-2.921e+01
Information Content per bp:1.771
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.1 +/- 17.5bp
Average Position of motif in Background49.5 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGACTTCWCAGAGTK
GTGACGTCACCG----
 A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTGACTTCWCAGAGTK
NNNGTGACCTTTGNNN---
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGACTTCWCAGAGTK
TTGACTTTT-------
 A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGACTTCWCAGAGTK
GTGACCTT--------
 A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGACTTCWCAGAGTK
NCGTGACN----------
 A C G T A C G T A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTGACTTCWCAGAGTK
ACGATGACGTCATCGA---
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTGACTTCWCAGAGTK
---ATTTCCAAGAA--
 A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTGACTTCWCAGAGTK
---NTTTCTNAGAAA-
 A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GTGACTTCWCAGAGTK
NNNNTGACCTTTNNNN---
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GTGACTTCWCAGAGTK
-TGTCANYT-------
 A C T G A C G T A C T G C G T A G T A C C G A T A G C T A G T C G C T A T G A C C G T A C T A G C G T A C T A G C G A T C A T G
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T