Information for 24-AATATAGTCACTAATT (Motif 36)

C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G A T C G T A A T C G A C G T A C T G C G T A A G T C A G C T C G T A A G C T C G T A A C G T A C G T
p-value:1e-4
log p-value:-9.364e+00
Information Content per bp:1.920
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.5 +/- 9.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:AATATAGTCACTAATT
--------CACTAATT
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AATATAGTCACTAATT-----
-----NNNCACTAATTANTNN
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

PH0034.1_Gbx2/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AATATAGTCACTAATT------
-----AANCGCTAATTAGCNNN
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

Hoxd8/MA0910.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AATATAGTCACTAATT-----
----NAGCCATTAATTANTTA
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AATATAGTCACTAATT-----
----NAGCCATTAATTANTTA
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0029.1_En2/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AATATAGTCACTAATT------
-----NTNCACTAATTAGNGCA
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C T A G C C T G A G A T C G A C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T C A T G A G T C G C T A

PH0033.1_Gbx1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AATATAGTCACTAATT------
-----TGCCACTAATTAGTGTA
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PH0132.1_Pax6/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AATATAGTCACTAATT-------
-------TGATTAATTAATTGAC
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

PH0099.1_Lhx9/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AATATAGTCACTAATT------
-----NGTNATTAATTAATGNG
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A C G T C T A G G C T A G A C T G A C T T G C A C T G A G A C T A C G T C T G A C T G A G A C T C T A G T A C G C T A G

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AATATAGTCACTAATT--
--GGAGGTCATTAATTAT
 C G T A C G T A A C G T C T G A A C G T C T G A A C T G A C G T A G T C C G T A A T G C A C G T C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T