Information for 23-TCCACACCCAAAATAG (Motif 35)

A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T A C G T A G C T C G A T A C T G A C T G A C T G A C G T C T A G A C G T A C T G A C T G C G T A
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.924
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.5 +/- 14.8bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TCCACACCCAAAATAG
GCCACACCCA------
 A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCCACACCCAAAATAG
GGCCACACCCAN-----
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCCACACCCAAAATAG
GGCCACACCCA------
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.67
Offset:6
Orientation:forward strand
Alignment:TCCACACCCAAAATAG
------CCAAAAATAG
 A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TCCACACCCAAAATAG-
-----KCCAAAAATAGC
 A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TCCACACCCAAAATAG-
-----DCYAAAAATAGM
 A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCCACACCCAAAATAG
GCCCCACCCA------
 A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCACACCCAAAATAG
GCCMCRCCCH------
 A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCACACCCAAAATAG
ANNTNCCCACCCANNAC--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCCACACCCAAAATAG--
---ATGCTAAAAATAGAA
 A C G T A G T C A G T C C G T A A G T C C G T A A G T C A G T C A G T C C G T A C T G A G T C A C G T A A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A