Information for 9-CTCTACTAGC (Motif 30)

A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C
Reverse Opposite:
C T A G A T G C A G C T C G T A C T A G G A C T G T C A T A C G T G C A C T A G
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.721
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif225.5
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets40.8 +/- 24.3bp
Average Position of motif in Background50.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCTACTAGC---
ACTTGCTACCTACACC
 A C G T A C G T A C G T A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCTACTAGC---
ACATGCTACCTAATAC
 A C G T A C G T A C G T A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CTCTACTAGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCTACTAGC
--CTAATKGV
 A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCTACTAGC----
CCTTAATNGNTTTT
 A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C A C G T A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCTACTAGC---
--NNACTTGCCTT
 A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C A C G T A C G T A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCTACTAGC
--NTAATTGN
 A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:-8
Orientation:forward strand
Alignment:--------CTCTACTAGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCTACTAGC-
--CTAATCGNT
 A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C A C G T
A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:-10
Orientation:forward strand
Alignment:----------CTCTACTAGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T C T G A G A T C C G A T T C G A T A C G A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C